J3_4V9C_067
3D structure
- PDB id
- 4V9C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Allosteric control of the ribosome by small-molecule antibiotics
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GAUAG*CAG*CGUGUCCUUGGUUCGAUUCCGAGUC
- Length
- 33 nucleotides
- Bulged bases
- 4V9C|1|CV|U|8, 4V9C|1|CV|U|45, 4V9C|1|CV|U|47
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V9C|1|CV|G|6
4V9C|1|CV|A|7
4V9C|1|CV|U|8
4V9C|1|CV|A|9
4V9C|1|CV|G|10
*
4V9C|1|CV|C|25
4V9C|1|CV|A|26
4V9C|1|CV|G|27
*
4V9C|1|CV|C|43
4V9C|1|CV|G|44
4V9C|1|CV|U|45
4V9C|1|CV|G|46
4V9C|1|CV|U|47
4V9C|1|CV|C|48
4V9C|1|CV|C|49
4V9C|1|CV|U|50
4V9C|1|CV|U|51
4V9C|1|CV|G|52
4V9C|1|CV|G|53
4V9C|1|CV|U|54
4V9C|1|CV|U|55
4V9C|1|CV|C|56
4V9C|1|CV|G|57
4V9C|1|CV|A|58
4V9C|1|CV|U|59
4V9C|1|CV|U|60
4V9C|1|CV|C|61
4V9C|1|CV|C|62
4V9C|1|CV|G|63
4V9C|1|CV|A|64
4V9C|1|CV|G|65
4V9C|1|CV|U|66
4V9C|1|CV|C|67
Current chains
- Chain CV
- Phenylalanine specific transfer RNA, tRNA-Phe
Nearby chains
- Chain CA
- Small subunit ribosomal RNA; SSU rRNA
- Chain CM
- 30S ribosomal protein S13
- Chain D1
- 50S ribosomal protein L33
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
- Chain DF
- 50S ribosomal protein L5
Coloring options: