J3_4V9O_140
3D structure
- PDB id
- 4V9O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Control of ribosomal subunit rotation by elongation factor G
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GC*GGAAUAU*AGC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V9O_140 not in the Motif Atlas
- Geometric match to J3_8C3A_082
- Geometric discrepancy: 0.2082
- The information below is about J3_8C3A_082
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_67856.2
- Basepair signature
- cWW-F-cWW-F-F-cSW-F-cWW
- Number of instances in this motif group
- 5
Unit IDs
4V9O|1|HA|G|46
4V9O|1|HA|C|47
*
4V9O|1|HA|G|361
4V9O|1|HA|G|362
4V9O|1|HA|A|363
4V9O|1|HA|A|364
4V9O|1|HA|U|365
4V9O|1|HA|A|366
4V9O|1|HA|U|367
*
4V9O|1|HA|A|393
4V9O|1|HA|G|394
4V9O|1|HA|C|395
Current chains
- Chain HA
- 16S rRNA
Nearby chains
- Chain HL
- 30S ribosomal protein S12
- Chain HP
- 30S ribosomal protein S16
- Chain HV
- Elongation factor G
Coloring options: