J3_4W21_007

3D structure

PDB id

4W21 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2 (this entry contains the large ribosomal subunit RNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCACGG*CUGAC*GGACAGUGC

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W21|1|5|G|3934
4W21|1|5|C|3935
4W21|1|5|A|3936
4W21|1|5|C|3937
4W21|1|5|G|3938
4W21|1|5|G|3939
*
4W21|1|5|C|4074
4W21|1|5|U|4075
4W21|1|5|G|4076
4W21|1|5|A|4077
4W21|1|5|C|4078
*
4W21|1|5|G|4168
4W21|1|5|G|4169
4W21|1|5|A|4170
4W21|1|5|C|4171
4W21|1|5|A|4172
4W21|1|5|G|4173
4W21|1|5|U|4174
4W21|1|5|G|4175
4W21|1|5|C|4176

Current chains

Chain 5

28S ribosomal RNA

Nearby chains