J3_4W21_013
3D structure
- PDB id
- 4W21 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2 (this entry contains the large ribosomal subunit RNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGUCCGCGCAGUCCGC*GCGGUGC*GACGUCGGCUAC
- Length
- 35 nucleotides
- Bulged bases
- 4W21|1|5|G|703
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4W21|1|5|G|443
4W21|1|5|G|444
4W21|1|5|U|445
4W21|1|5|C|446
4W21|1|5|C|447
4W21|1|5|G|448
4W21|1|5|C|449
4W21|1|5|G|450
4W21|1|5|C|451
4W21|1|5|A|452
4W21|1|5|G|453
4W21|1|5|U|454
4W21|1|5|C|455
4W21|1|5|C|456
4W21|1|5|G|457
4W21|1|5|C|458
*
4W21|1|5|G|698
4W21|1|5|C|699
4W21|1|5|G|700
4W21|1|5|G|701
4W21|1|5|U|702
4W21|1|5|G|703
4W21|1|5|C|704
*
4W21|1|5|G|1293
4W21|1|5|A|1294
4W21|1|5|C|1295
4W21|1|5|G|1296
4W21|1|5|U|1297
4W21|1|5|C|1298
4W21|1|5|G|1299
4W21|1|5|G|1300
4W21|1|5|C|1301
4W21|1|5|U|1302
4W21|1|5|A|1303
4W21|1|5|C|1304
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
Coloring options: