J3_4W23_006
3D structure
- PDB id
- 4W23 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2 (this entry contains the small ribosomal subunit)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UCUUAG*CGAGAC*GCAAUA
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4W23|1|2|U|1340
4W23|1|2|C|1341
4W23|1|2|U|1342
4W23|1|2|U|1343
4W23|1|2|A|1344
4W23|1|2|G|1345
*
4W23|1|2|C|1384
4W23|1|2|G|1385
4W23|1|2|A|1386
4W23|1|2|G|1387
4W23|1|2|A|1388
4W23|1|2|C|1389
*
4W23|1|2|G|1481
4W23|1|2|C|1482
4W23|1|2|A|1483
4W23|1|2|A|1484
4W23|1|2|U|1485
4W23|1|2|A|1486
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain C
- Ribosomal protein uS5
- Chain D
- Ribosomal protein uS3
- Chain Q
- Ribosomal protein uS9
- Chain R
- Ribosomal protein eS17
- Chain U
- Ribosomal protein uS10
- Chain d
- Ribosomal protein uS14
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