3D structure

PDB id
4W29 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
Experimental method
X-RAY DIFFRACTION
Resolution
3.8 Å

Loop

Sequence
GUG*CGAGUAC*GGAAUC
Length
16 nucleotides
Bulged bases
4W29|1|BA|U|271|||C, 4W29|1|BA|G|370
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4W29|1|BA|G|271|||B
4W29|1|BA|U|271|||C
4W29|1|BA|G|271|||D
*
4W29|1|BA|C|357|||O
4W29|1|BA|G|370
4W29|1|BA|A|371
4W29|1|BA|G|372
4W29|1|BA|U|373
4W29|1|BA|A|374
4W29|1|BA|C|375
*
4W29|1|BA|G|399
4W29|1|BA|G|400
4W29|1|BA|A|401
4W29|1|BA|A|402
4W29|1|BA|U|403
4W29|1|BA|C|404

Current chains

Chain BA
23S Ribosomal RNA

Nearby chains

Chain B1
50S ribosomal protein L28

Coloring options:

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