J3_4W2E_025
3D structure
- PDB id
- 4W2E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CGAAG*CGCCAGAGAG*CGUAG
- Length
- 20 nucleotides
- Bulged bases
- 4W2E|1|A|G|321
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4W2E_025 not in the Motif Atlas
- Homologous match to J3_9DFE_006
- Geometric discrepancy: 0.0822
- The information below is about J3_9DFE_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_77124.1
- Basepair signature
- cWW-tSH-cHH-cSW-F-tHS-cWW-cWW-F-F-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
4W2E|1|A|C|297
4W2E|1|A|G|298
4W2E|1|A|A|299
4W2E|1|A|A|300
4W2E|1|A|G|301
*
4W2E|1|A|C|316
4W2E|1|A|G|317
4W2E|1|A|C|318
4W2E|1|A|C|319
4W2E|1|A|A|320
4W2E|1|A|G|321
4W2E|1|A|A|322
4W2E|1|A|G|323
4W2E|1|A|A|324
4W2E|1|A|G|325
*
4W2E|1|A|C|337
4W2E|1|A|G|338
4W2E|1|A|U|339
4W2E|1|A|A|340
4W2E|1|A|G|341
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain F
- 50S ribosomal protein L4
- Chain Y
- 50S ribosomal protein L24
Coloring options: