J3_4W2E_033
3D structure
- PDB id
- 4W2E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GC*GGAAUCU*AGC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4W2E_033 not in the Motif Atlas
- Geometric match to J3_4V88_078
- Geometric discrepancy: 0.2142
- The information below is about J3_4V88_078
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_67856.1
- Basepair signature
- cWW-F-cWW-F-F-cSW-F-cWW
- Number of instances in this motif group
- 5
Unit IDs
4W2E|1|a|G|46
4W2E|1|a|C|47
*
4W2E|1|a|G|361
4W2E|1|a|G|362
4W2E|1|a|A|363
4W2E|1|a|A|364
4W2E|1|a|U|365
4W2E|1|a|C|366
4W2E|1|a|U|367
*
4W2E|1|a|A|393
4W2E|1|a|G|394
4W2E|1|a|C|395
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
- Chain p
- 30S ribosomal protein S16
- Chain y
- 50S ribosomal protein L9, Elongation factor 4
Coloring options: