J3_4W2G_016
3D structure
- PDB id
- 4W2G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- CAC*GGUAAG*CGAGG
- Length
- 14 nucleotides
- Bulged bases
- 4W2G|1|BA|A|2803
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4W2G_016 not in the Motif Atlas
- Homologous match to J3_7RQB_013
- Geometric discrepancy: 0.0961
- The information below is about J3_7RQB_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_24416.1
- Basepair signature
- cWW-F-F-tWH-cWW-F-tHS-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
4W2G|1|BA|C|2802
4W2G|1|BA|A|2803
4W2G|1|BA|C|2804
*
4W2G|1|BA|G|2816
4W2G|1|BA|G|2817
4W2G|1|BA|U|2818
4W2G|1|BA|A|2819
4W2G|1|BA|A|2820
4W2G|1|BA|G|2821
*
4W2G|1|BA|C|2899
4W2G|1|BA|G|2900
4W2G|1|BA|A|2901
4W2G|1|BA|G|2902
4W2G|1|BA|G|2903
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain BE
- 50S Ribosomal Protein L3
- Chain BW
- 50S Ribosomal Protein L22
Coloring options: