J3_4W4G_050
3D structure
- PDB id
- 4W4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GCGGGAC*GGCAG*CC
- Length
- 14 nucleotides
- Bulged bases
- 4W4G|1|RA|A|1384
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4W4G_050 not in the Motif Atlas
- Homologous match to J3_9DFE_012
- Geometric discrepancy: 0.0998
- The information below is about J3_9DFE_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_31965.2
- Basepair signature
- cWW-F-cWW-F-F-F-F-F-cWW-F
- Number of instances in this motif group
- 6
Unit IDs
4W4G|1|RA|G|1344
4W4G|1|RA|C|1345
4W4G|1|RA|G|1346
4W4G|1|RA|G|1347
4W4G|1|RA|G|1348
4W4G|1|RA|A|1349
4W4G|1|RA|C|1350
*
4W4G|1|RA|G|1381
4W4G|1|RA|G|1382
4W4G|1|RA|C|1383
4W4G|1|RA|A|1384
4W4G|1|RA|G|1385
*
4W4G|1|RA|C|1402
4W4G|1|RA|C|1403
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R7
- 50S ribosomal protein L34
- Chain RX
- 50S ribosomal protein L23
Coloring options: