J3_4WCE_001
3D structure
- PDB id
- 4WCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the large ribosomal subunit of Staphylococcus aureus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.53 Å
Loop
- Sequence
- UGAUCUA*UAG*CGAA
- Length
- 14 nucleotides
- Bulged bases
- 4WCE|1|X|U|731, 4WCE|1|X|G|837, 4WCE|1|X|A|838
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WCE_001 not in the Motif Atlas
- Homologous match to J3_4WF9_002
- Geometric discrepancy: 0.0746
- The information below is about J3_4WF9_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46658.1
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 10
Unit IDs
4WCE|1|X|U|728
4WCE|1|X|G|729
4WCE|1|X|A|730
4WCE|1|X|U|731
4WCE|1|X|C|732
4WCE|1|X|U|733
4WCE|1|X|A|734
*
4WCE|1|X|U|818
4WCE|1|X|A|819
4WCE|1|X|G|820
*
4WCE|1|X|C|836
4WCE|1|X|G|837
4WCE|1|X|A|838
4WCE|1|X|A|839
Current chains
- Chain X
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain A
- 50S ribosomal protein L2
Coloring options: