J3_4WF9_018

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

UUGA*UCUAACC*GAGACAG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_60833.1

Basepair signature

cWW-F-F-F-tHH-F-cWW-F-cWW-cWW-F-F-F

Number of instances in this motif group

1

Unit IDs

4WF9|1|X|U|2118
4WF9|1|X|U|2119
4WF9|1|X|G|2120
4WF9|1|X|A|2121
*
4WF9|1|X|U|2222
4WF9|1|X|C|2223
4WF9|1|X|U|2224
4WF9|1|X|A|2225
4WF9|1|X|A|2226
4WF9|1|X|C|2227
4WF9|1|X|C|2228
*
4WF9|1|X|G|2249
4WF9|1|X|A|2250
4WF9|1|X|G|2251
4WF9|1|X|A|2252
4WF9|1|X|C|2253
4WF9|1|X|A|2254
4WF9|1|X|G|2255

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain A

50S ribosomal protein L2