Motif J3_60833.1 Version J3_60833.1 of this group appears in releases 3.88 to 3.89
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 14 | break | 15 | 16 | 17 | 18 | 1-18 | 2-17 | 3-4 | 3-11 | 5-10 | 6-9 | 7-8 | 13-16 | 14-15 | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | J3_4WF9_018 | 4WF9 | 0.0000 | 0 | X | LSU rRNA | U | 2222 | C | 2223 | U | 2224 | A | 2225 | A | 2226 | C | 2227 | C | 2228 | * | G | 2249 | A | 2250 | G | 2251 | A | 2252 | C | 2253 | A | 2254 | G | 2255 | * | U | 2118 | U | 2119 | G | 2120 | A | 2121 | cWW | ncWW | ncSH | ntWH | ntHS | cWWa | cWW | tHH | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UUGA*UCUAACC*GAGACAG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
UG*CUAAC*AGACA | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-F-tHH-F-cWW-F-cWW-cWW-F-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: