J3_4WF9_021

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

CC*GUUAAU*AAUCG

Length

13 nucleotides

Bulged bases

4WF9|1|X|U|2853, 4WF9|1|X|A|2855

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76911.2

Basepair signature

cWW-tHS-F-F-F-cWW-cWW

Number of instances in this motif group

4

Unit IDs

4WF9|1|X|C|2834
4WF9|1|X|C|2835
*
4WF9|1|X|G|2851
4WF9|1|X|U|2852
4WF9|1|X|U|2853
4WF9|1|X|A|2854
4WF9|1|X|A|2855
4WF9|1|X|U|2856
*
4WF9|1|X|A|2902
4WF9|1|X|A|2903
4WF9|1|X|U|2904
4WF9|1|X|C|2905
4WF9|1|X|G|2906

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain B

50S ribosomal protein L3

Chain K

50S ribosomal protein L17

Chain Z

50S ribosomal protein L32