J3_4WF9_022

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

CAAAC*GGGUUGUA*UG

Length

15 nucleotides

Bulged bases

4WF9|1|X|U|301

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_97971.2

Basepair signature

cWW-F-F-tSH-cSH-tWH-tWS-cWW-F-cWW

Number of instances in this motif group

3

Unit IDs

4WF9|1|X|C|272
4WF9|1|X|A|273
4WF9|1|X|A|274
4WF9|1|X|A|275
4WF9|1|X|C|276
*
4WF9|1|X|G|295
4WF9|1|X|G|296
4WF9|1|X|G|297
4WF9|1|X|U|298
4WF9|1|X|U|299
4WF9|1|X|G|300
4WF9|1|X|U|301
4WF9|1|X|A|302
*
4WF9|1|X|U|415
4WF9|1|X|G|416

Current chains

Chain X

23S ribosomal RNA

Nearby chains