J3_4WFA_009
3D structure
- PDB id
- 4WFA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.39 Å
Loop
- Sequence
- CUC*GAG*CAUAAG
- Length
- 12 nucleotides
- Bulged bases
- 4WFA|1|X|U|2361
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WFA_009 not in the Motif Atlas
- Homologous match to J3_4WF9_008
- Geometric discrepancy: 0.0894
- The information below is about J3_4WF9_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_05327.1
- Basepair signature
- cWW-tWH-tWW-cWW-F-cWW
- Number of instances in this motif group
- 10
Unit IDs
4WFA|1|X|C|2322
4WFA|1|X|U|2323
4WFA|1|X|C|2324
*
4WFA|1|X|G|2348
4WFA|1|X|A|2349
4WFA|1|X|G|2350
*
4WFA|1|X|C|2359
4WFA|1|X|A|2360
4WFA|1|X|U|2361
4WFA|1|X|A|2362
4WFA|1|X|A|2363
4WFA|1|X|G|2364
Current chains
- Chain X
- 23S rRNA
Nearby chains
- Chain D
- 50S ribosomal protein L5
- Chain L
- 50S ribosomal protein L18
- Chain T
- 50S ribosomal protein L27
- Chain Y
- 5S ribosomal RNA; 5S rRNA
Coloring options: