J3_4WQF_017
3D structure
- PDB id
- 4WQF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- CGC*GGACUGC*GAGGAAGGAG
- Length
- 20 nucleotides
- Bulged bases
- 4WQF|1|BA|A|1183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WQF_017 not in the Motif Atlas
- Geometric match to J3_6CZR_025
- Geometric discrepancy: 0.1435
- The information below is about J3_6CZR_025
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17791.1
- Basepair signature
- cWW-cSH-cWW-cWH-tWH-tSW-cWW-tWS-F-cWW-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
4WQF|1|BA|C|1116
4WQF|1|BA|G|1117
4WQF|1|BA|C|1118
*
4WQF|1|BA|G|1155
4WQF|1|BA|G|1156
4WQF|1|BA|A|1157
4WQF|1|BA|C|1158
4WQF|1|BA|U|1159
4WQF|1|BA|G|1160
4WQF|1|BA|C|1161
*
4WQF|1|BA|G|1175
4WQF|1|BA|A|1176
4WQF|1|BA|G|1177
4WQF|1|BA|G|1178
4WQF|1|BA|A|1179
4WQF|1|BA|A|1180
4WQF|1|BA|G|1181
4WQF|1|BA|G|1182
4WQF|1|BA|A|1183
4WQF|1|BA|G|1184
Current chains
- Chain BA
- 16S Ribosomal RNA
Nearby chains
- Chain BB
- 30S ribosomal protein S2
- Chain BI
- 30S ribosomal protein S9
- Chain BJ
- 30S ribosomal protein S10
- Chain BN
- 30S ribosomal protein S14 type Z
Coloring options: