J3_4WQF_061

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGAAG*CGCCAGAGAG*CGUAG

Length

20 nucleotides

Bulged bases

4WQF|1|CA|G|321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4WQF_061 not in the Motif Atlas

Homologous match to J3_9DFE_006

Geometric discrepancy: 0.067

The information below is about J3_9DFE_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_77124.1

Basepair signature

cWW-tSH-cHH-cSW-F-tHS-cWW-cWW-F-F-cWW-F

Number of instances in this motif group

4

Unit IDs

4WQF|1|CA|C|297
4WQF|1|CA|G|298
4WQF|1|CA|A|299
4WQF|1|CA|A|300
4WQF|1|CA|G|301
*
4WQF|1|CA|C|316
4WQF|1|CA|G|317
4WQF|1|CA|C|318
4WQF|1|CA|C|319
4WQF|1|CA|A|320
4WQF|1|CA|G|321
4WQF|1|CA|A|322
4WQF|1|CA|G|323
4WQF|1|CA|A|324
4WQF|1|CA|G|325
*
4WQF|1|CA|C|337
4WQF|1|CA|G|338
4WQF|1|CA|U|339
4WQF|1|CA|A|340
4WQF|1|CA|G|341

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain CF

50S ribosomal protein L4

Chain CY

50S ribosomal protein L24