J3_4WQY_038
3D structure
- PDB id
- 4WQY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- AC*GAUAAGC*GAUGU
- Length
- 14 nucleotides
- Bulged bases
- 4WQY|1|AA|U|71, 4WQY|1|AA|A|73
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WQY_038 not in the Motif Atlas
- Homologous match to J3_9DFE_004
- Geometric discrepancy: 0.0591
- The information below is about J3_9DFE_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_01004.1
- Basepair signature
- cWW-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 10
Unit IDs
4WQY|1|AA|A|55
4WQY|1|AA|C|56
*
4WQY|1|AA|G|69
4WQY|1|AA|A|70
4WQY|1|AA|U|71
4WQY|1|AA|A|72
4WQY|1|AA|A|73
4WQY|1|AA|G|74
4WQY|1|AA|C|75
*
4WQY|1|AA|G|108
4WQY|1|AA|A|109
4WQY|1|AA|U|110
4WQY|1|AA|G|111
4WQY|1|AA|U|112
Current chains
- Chain AA
- 23S Ribosomal RNA
Nearby chains
- Chain A2
- 50S ribosomal protein L29
- Chain A7
- 50S ribosomal protein L34
- Chain AX
- 50S ribosomal protein L23
Coloring options: