J3_4WQY_043
3D structure
- PDB id
- 4WQY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GCC*GCCUAGUGAACC*GAUCAAC
- Length
- 22 nucleotides
- Bulged bases
- 4WQY|1|AA|A|2400, 4WQY|1|AA|U|2402, 4WQY|1|AA|A|2438
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WQY_043 not in the Motif Atlas
- Homologous match to J3_9DFE_015
- Geometric discrepancy: 0.0539
- The information below is about J3_9DFE_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_04772.1
- Basepair signature
- cWW-F-tHH-cWW-tHW-tHW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
4WQY|1|AA|G|2294
4WQY|1|AA|C|2295
4WQY|1|AA|C|2296
*
4WQY|1|AA|G|2396
4WQY|1|AA|C|2397
4WQY|1|AA|C|2398
4WQY|1|AA|U|2399
4WQY|1|AA|A|2400
4WQY|1|AA|G|2401
4WQY|1|AA|U|2402
4WQY|1|AA|G|2403
4WQY|1|AA|A|2404
4WQY|1|AA|A|2405
4WQY|1|AA|C|2406
4WQY|1|AA|C|2407
*
4WQY|1|AA|G|2433
4WQY|1|AA|A|2434
4WQY|1|AA|U|2435
4WQY|1|AA|C|2436
4WQY|1|AA|A|2437
4WQY|1|AA|A|2438
4WQY|1|AA|C|2439
Current chains
- Chain AA
- 23S Ribosomal RNA
Nearby chains
- Chain A0
- 50S ribosomal protein L27
- Chain A1
- 50S ribosomal protein L28
- Chain A6
- 50S ribosomal protein L33
- Chain A8
- 50S ribosomal protein L35
- Chain AP
- 50S ribosomal protein L15
Coloring options: