J3_4WQY_060

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGAAGACAGCCAGGAGGUUG*CAUCCUUUAAAGAGUG*CUCACUGGUCGAG

Length

49 nucleotides

Bulged bases

4WQY|1|CA|A|1046, 4WQY|1|CA|G|1047, 4WQY|1|CA|U|1061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQY|1|CA|C|1043
4WQY|1|CA|G|1044
4WQY|1|CA|A|1045
4WQY|1|CA|A|1046
4WQY|1|CA|G|1047
4WQY|1|CA|A|1048
4WQY|1|CA|C|1049
4WQY|1|CA|A|1050
4WQY|1|CA|G|1051
4WQY|1|CA|C|1052
4WQY|1|CA|C|1053
4WQY|1|CA|A|1054
4WQY|1|CA|G|1055
4WQY|1|CA|G|1056
4WQY|1|CA|A|1057
4WQY|1|CA|G|1058
4WQY|1|CA|G|1059
4WQY|1|CA|U|1060
4WQY|1|CA|U|1061
4WQY|1|CA|G|1062
*
4WQY|1|CA|C|1076
4WQY|1|CA|A|1077
4WQY|1|CA|U|1078
4WQY|1|CA|C|1079
4WQY|1|CA|C|1080
4WQY|1|CA|U|1081
4WQY|1|CA|U|1082
4WQY|1|CA|U|1083
4WQY|1|CA|A|1084
4WQY|1|CA|A|1085
4WQY|1|CA|A|1086
4WQY|1|CA|G|1087
4WQY|1|CA|A|1088
4WQY|1|CA|G|1089
4WQY|1|CA|U|1090
4WQY|1|CA|G|1091
*
4WQY|1|CA|C|1100
4WQY|1|CA|U|1101
4WQY|1|CA|C|1102
4WQY|1|CA|A|1103
4WQY|1|CA|C|1104
4WQY|1|CA|U|1105
4WQY|1|CA|G|1106
4WQY|1|CA|G|1107
4WQY|1|CA|U|1108
4WQY|1|CA|C|1109
4WQY|1|CA|G|1110
4WQY|1|CA|A|1111
4WQY|1|CA|G|1112

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C9

50S ribosomal protein L36

Chain CH

50S ribosomal protein L6

Chain CK

50S ribosomal protein L10

Chain CL

50S ribosomal protein L11

Chain CQ

50S ribosomal protein L16

Chain CZ

50S ribosomal protein L25