J3_4WR6_063
3D structure
- PDB id
- 4WR6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- UG*UGUUG*CGCAA
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WR6_063 not in the Motif Atlas
- Homologous match to J3_6CZR_024
- Geometric discrepancy: 0.1695
- The information below is about J3_6CZR_024
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_04260.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
4WR6|1|1G|U|1073||||P_1
4WR6|1|1G|G|1074||||P_1
*
4WR6|1|1G|U|1083||||P_1
4WR6|1|1G|G|1084||||P_1
4WR6|1|1G|U|1085||||P_1
4WR6|1|1G|U|1086||||P_1
4WR6|1|1G|G|1087||||P_1
*
4WR6|1|1G|C|1098||||P_1
4WR6|1|1G|G|1099||||P_1
4WR6|1|1G|C|1100||||P_1
4WR6|1|1G|A|1101||||P_1
4WR6|1|1G|A|1102||||P_1
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 12
- 30S ribosomal protein S2
- Chain 42
- 30S ribosomal protein S5
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