J3_4WT8_044

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UGGAG*CUAC*GGAA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WT8|1|Bb|U|921
4WT8|1|Bb|G|922
4WT8|1|Bb|G|923
4WT8|1|Bb|A|924
4WT8|1|Bb|G|925
*
4WT8|1|Bb|C|1216
4WT8|1|Bb|U|1217
4WT8|1|Bb|A|1218
4WT8|1|Bb|C|1219
*
4WT8|1|Bb|G|1319
4WT8|1|Bb|G|1320
4WT8|1|Bb|A|1321
4WT8|1|Bb|A|1322

Current chains

Chain Bb

RNA (1504-MER)

Nearby chains

Chain BI

30S ribosomal protein S9

Chain BM

30S ribosomal protein S13

Chain BW

30S ribosomal protein Thx

Chain D3

Transfer RNA; tRNA

Chain D4

Transfer RNA; tRNA