J3_4WT8_050
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- AC*GAUAAGC*GAUGU
- Length
- 14 nucleotides
- Bulged bases
- 4WT8|1|C1|U|70, 4WT8|1|C1|A|72
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WT8_050 not in the Motif Atlas
- Homologous match to J3_5J7L_037
- Geometric discrepancy: 0.126
- The information below is about J3_5J7L_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_35667.2
- Basepair signature
- cWW-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
4WT8|1|C1|A|54
4WT8|1|C1|C|55
*
4WT8|1|C1|G|68
4WT8|1|C1|A|69
4WT8|1|C1|U|70
4WT8|1|C1|A|71
4WT8|1|C1|A|72
4WT8|1|C1|G|73
4WT8|1|C1|C|74
*
4WT8|1|C1|G|107
4WT8|1|C1|A|108
4WT8|1|C1|U|109
4WT8|1|C1|G|110
4WT8|1|C1|U|111
Current chains
- Chain C1
- 23S rRNA (2899-MER)
Nearby chains
- Chain C8
- 50S ribosomal protein L34
- Chain CK
- 50S ribosomal protein L29
- Chain CX
- 50S ribosomal protein L23
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