J3_4WWW_036
3D structure
- PDB id
- 4WWW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to CEM-101
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CAUC*GUA*UUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 4WWW|1|YA|A|2518
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WWW_036 not in the Motif Atlas
- Homologous match to J3_5J7L_046
- Geometric discrepancy: 0.0764
- The information below is about J3_5J7L_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.5
- Basepair signature
- cWW-tWH-cHW-F-cWW-tSS-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
4WWW|1|YA|C|2517
4WWW|1|YA|A|2518
4WWW|1|YA|U|2519
4WWW|1|YA|C|2520
*
4WWW|1|YA|G|2545
4WWW|1|YA|U|2546
4WWW|1|YA|A|2547
*
4WWW|1|YA|U|2561
4WWW|1|YA|U|2562
4WWW|1|YA|U|2563
4WWW|1|YA|A|2564
4WWW|1|YA|A|2565
4WWW|1|YA|A|2566
4WWW|1|YA|G|2567
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain YD
- 50S ribosomal protein L3
- Chain YK
- 50S ribosomal protein L14
Coloring options: