J3_4WWW_049

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CAAUG*CGUAGUCCGGAUU*AUGAAGUCG

Length

27 nucleotides

Bulged bases

4WWW|1|QA|U|1240, 4WWW|1|QA|C|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WWW|1|QA|C|1237
4WWW|1|QA|A|1238
4WWW|1|QA|A|1239
4WWW|1|QA|U|1240
4WWW|1|QA|G|1241
*
4WWW|1|QA|C|1296
4WWW|1|QA|G|1297
4WWW|1|QA|U|1298
4WWW|1|QA|A|1299
4WWW|1|QA|G|1300
4WWW|1|QA|U|1301
4WWW|1|QA|C|1302
4WWW|1|QA|C|1303
4WWW|1|QA|G|1304
4WWW|1|QA|G|1305
4WWW|1|QA|A|1306
4WWW|1|QA|U|1307
4WWW|1|QA|U|1308
*
4WWW|1|QA|A|1329
4WWW|1|QA|U|1330
4WWW|1|QA|G|1331
4WWW|1|QA|A|1332
4WWW|1|QA|A|1333
4WWW|1|QA|G|1334
4WWW|1|QA|U|1335
4WWW|1|QA|C|1336
4WWW|1|QA|G|1337

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QG

30S ribosomal protein S7

Chain QM

30S ribosomal protein S13