J3_4WWW_074
3D structure
- PDB id
- 4WWW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to CEM-101
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CUG*CUAACG*CGGACAG
- Length
- 16 nucleotides
- Bulged bases
- 4WWW|1|YA|A|2198
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WWW_074 not in the Motif Atlas
- Homologous match to J3_4WF9_007
- Geometric discrepancy: 0.179
- The information below is about J3_4WF9_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_07703.1
- Basepair signature
- cWW-cWW-tSH-F-F-F-F-F-cWW-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
4WWW|1|YA|C|2091
4WWW|1|YA|U|2092
4WWW|1|YA|G|2093
*
4WWW|1|YA|C|2196
4WWW|1|YA|U|2197
4WWW|1|YA|A|2198
4WWW|1|YA|A|2199
4WWW|1|YA|C|2200
4WWW|1|YA|G|2201
*
4WWW|1|YA|C|2222
4WWW|1|YA|G|2223
4WWW|1|YA|G|2224
4WWW|1|YA|A|2225
4WWW|1|YA|C|2226
4WWW|1|YA|A|2227
4WWW|1|YA|G|2228
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain YC
- 50S ribosomal protein L2
- Chain YH
- 50S ribosomal protein L9
- Chain YX
- 50S ribosomal protein L28
Coloring options: