J3_4WWW_079
3D structure
- PDB id
- 4WWW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to CEM-101
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AC*GAUAAGC*GAUUU
- Length
- 14 nucleotides
- Bulged bases
- 4WWW|1|YA|A|74
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WWW_079 not in the Motif Atlas
- Homologous match to J3_5J7L_037
- Geometric discrepancy: 0.1464
- The information below is about J3_5J7L_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_35667.2
- Basepair signature
- cWW-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
4WWW|1|YA|A|56
4WWW|1|YA|C|57
*
4WWW|1|YA|G|70
4WWW|1|YA|A|71
4WWW|1|YA|U|72
4WWW|1|YA|A|73
4WWW|1|YA|A|74
4WWW|1|YA|G|75
4WWW|1|YA|C|76
*
4WWW|1|YA|G|110
4WWW|1|YA|A|111
4WWW|1|YA|U|112
4WWW|1|YA|U|113
4WWW|1|YA|U|114
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y2
- 50S ribosomal protein L34
- Chain YT
- 50S ribosomal protein L23
- Chain YY
- 50S ribosomal protein L29
Coloring options: