J3_4WZO_046

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CCAAG*CGCAAAC*GUGG

Length

16 nucleotides

Bulged bases

4WZO|1|14|A|1609

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4WZO_046 not in the Motif Atlas

Homologous match to J3_4WF9_005

Geometric discrepancy: 0.1552

The information below is about J3_4WF9_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_68164.1

Basepair signature

cWW-tSH-F-F-tHW-F-F-cWW-cWW-F

Number of instances in this motif group

1

Unit IDs

4WZO|1|14|C|1305
4WZO|1|14|C|1306
4WZO|1|14|A|1307
4WZO|1|14|A|1308
4WZO|1|14|G|1309
*
4WZO|1|14|C|1605
4WZO|1|14|G|1606
4WZO|1|14|C|1607
4WZO|1|14|A|1608
4WZO|1|14|A|1609
4WZO|1|14|A|1610
4WZO|1|14|C|1611
*
4WZO|1|14|G|1620
4WZO|1|14|U|1621
4WZO|1|14|G|1622
4WZO|1|14|G|1623

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain L5

50S ribosomal protein L34