J3_4XEJ_029

3D structure

PDB id

4XEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

IRES bound to bacterial Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GGG*CUUUAAAGAGUG*CUCAC

Length

20 nucleotides

Bulged bases

4XEJ|1|B23S|A|1088

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4XEJ|1|B23S|G|1055
4XEJ|1|B23S|G|1056
4XEJ|1|B23S|G|1058
*
4XEJ|1|B23S|C|1080
4XEJ|1|B23S|U|1081
4XEJ|1|B23S|U|1082
4XEJ|1|B23S|U|1083
4XEJ|1|B23S|A|1084
4XEJ|1|B23S|A|1085
4XEJ|1|B23S|A|1086
4XEJ|1|B23S|G|1087
4XEJ|1|B23S|A|1088
4XEJ|1|B23S|G|1089
4XEJ|1|B23S|U|1090
4XEJ|1|B23S|G|1091
*
4XEJ|1|B23S|C|1100
4XEJ|1|B23S|U|1101
4XEJ|1|B23S|C|1102
4XEJ|1|B23S|A|1103
4XEJ|1|B23S|C|1104

Current chains

Chain B23S

23S ribosomal RNA

Nearby chains

Chain BL11

50S ribosomal protein L11