J3_5A8L_002
3D structure
- PDB id
- 5A8L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human eRF1 and the hCMV nascent peptide in the translation termination complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAAGGUGGC*GAAUCCGCUAAGGAGUG*CUCAC
- Length
- 31 nucleotides
- Bulged bases
- 5A8L|1|A|G|1956
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5A8L|1|A|G|1950
5A8L|1|A|A|1951
5A8L|1|A|A|1952
5A8L|1|A|G|1953
5A8L|1|A|G|1954
5A8L|1|A|U|1955
5A8L|1|A|G|1956
5A8L|1|A|G|1957
5A8L|1|A|C|1958
*
5A8L|1|A|G|1970
5A8L|1|A|A|1971
5A8L|1|A|A|1972
5A8L|1|A|U|1973
5A8L|1|A|C|1974
5A8L|1|A|C|1975
5A8L|1|A|G|1976
5A8L|1|A|C|1977
5A8L|1|A|U|1978
5A8L|1|A|A|1979
5A8L|1|A|A|1980
5A8L|1|A|G|1981
5A8L|1|A|G|1982
5A8L|1|A|A|1983
5A8L|1|A|G|1984
5A8L|1|A|U|1985
5A8L|1|A|G|1986
*
5A8L|1|A|C|1995
5A8L|1|A|U|1996
5A8L|1|A|C|1997
5A8L|1|A|A|1998
5A8L|1|A|C|1999
Current chains
- Chain A
- 28S RIBOSOMAL RNA
Nearby chains
- Chain G
- 60S RIBOSOMAL PROTEIN L12
- Chain Q
- EUKARYOTIC RELEASE FACTOR ERF1
Coloring options: