J3_5AJ0_005

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAC*GCUAAGGAGUG*CUCAC

Length

19 nucleotides

Bulged bases

5AJ0|1|A2|A|1983

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ0|1|A2|G|1950
5AJ0|1|A2|A|1951
5AJ0|1|A2|C|1952
*
5AJ0|1|A2|G|1976
5AJ0|1|A2|C|1977
5AJ0|1|A2|U|1978
5AJ0|1|A2|A|1979
5AJ0|1|A2|A|1980
5AJ0|1|A2|G|1981
5AJ0|1|A2|G|1982
5AJ0|1|A2|A|1983
5AJ0|1|A2|G|1984
5AJ0|1|A2|U|1985
5AJ0|1|A2|G|1986
*
5AJ0|1|A2|C|1995
5AJ0|1|A2|U|1996
5AJ0|1|A2|C|1997
5AJ0|1|A2|A|1998
5AJ0|1|A2|C|1999

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AK

60S acidic ribosomal protein P0

Chain Aq

60S ribosomal protein L12