J3_5AJ0_008

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ0|1|A2|A|2530
5AJ0|1|A2|G|2531
5AJ0|1|A2|A|2532
5AJ0|1|A2|U|2533
5AJ0|1|A2|G|2534
*
5AJ0|1|A2|C|2551
5AJ0|1|A2|A|2552
5AJ0|1|A2|G|2553
5AJ0|1|A2|U|2554
*
5AJ0|1|A2|A|2736
5AJ0|1|A2|G|2737
5AJ0|1|A2|G|2738
5AJ0|1|A2|G|2739
5AJ0|1|A2|U|2740
5AJ0|1|A2|G|2741
5AJ0|1|A2|U|2742
5AJ0|1|A2|A|2743
5AJ0|1|A2|A|2744
5AJ0|1|A2|A|2745
5AJ0|1|A2|U|2746

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AZ

60S ribosomal protein L27