J3_5AJ0_013

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAU*GCUUCUG*CAAGG

Length

15 nucleotides

Bulged bases

5AJ0|1|A2|U|4946, 5AJ0|1|A2|U|4949, 5AJ0|1|A2|A|5019

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ0|1|A2|C|4928
5AJ0|1|A2|A|4929
5AJ0|1|A2|U|4930
*
5AJ0|1|A2|G|4944
5AJ0|1|A2|C|4945
5AJ0|1|A2|U|4946
5AJ0|1|A2|U|4947
5AJ0|1|A2|C|4948
5AJ0|1|A2|U|4949
5AJ0|1|A2|G|4950
*
5AJ0|1|A2|C|5017
5AJ0|1|A2|A|5018
5AJ0|1|A2|A|5019
5AJ0|1|A2|G|5020
5AJ0|1|A2|G|5021

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AB

60S ribosomal protein L3

Chain AP

60S ribosomal protein L17

Chain Ad

60S ribosomal protein L31