J3_5AJ0_024
3D structure
- PDB id
- 5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo electron microscopy of actively translating human polysomes (POST state).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AJ0|1|B1|C|1391
5AJ0|1|B1|U|1392
5AJ0|1|B1|G|1393
5AJ0|1|B1|G|1394
5AJ0|1|B1|C|1395
*
5AJ0|1|B1|G|1450
5AJ0|1|B1|G|1451
5AJ0|1|B1|A|1452
5AJ0|1|B1|C|1453
5AJ0|1|B1|A|1454
5AJ0|1|B1|A|1455
5AJ0|1|B1|G|1456
*
5AJ0|1|B1|C|1470
5AJ0|1|B1|C|1471
5AJ0|1|B1|C|1472
5AJ0|1|B1|G|1473
5AJ0|1|B1|A|1474
5AJ0|1|B1|G|1475
5AJ0|1|B1|A|1476
5AJ0|1|B1|U|1477
5AJ0|1|B1|U|1478
5AJ0|1|B1|G|1479
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BD
- 40S ribosomal protein S3
- Chain BF
- 40S ribosomal protein S5
- Chain BQ
- 40S ribosomal protein S16
- Chain BR
- 40S ribosomal protein S17-like
- Chain BU
- 40S ribosomal protein S20
- Chain Bd
- 40S ribosomal protein S29
- Chain Bg
- Guanine nucleotide-binding protein subunit beta-2-like 1
Coloring options: