J3_5AJ0_039
3D structure
- PDB id
- 5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo electron microscopy of actively translating human polysomes (POST state).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AG*CGCAAAUUA*UAGU
- Length
- 15 nucleotides
- Bulged bases
- 5AJ0|1|B1|U|488
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AJ0|1|B1|A|40
5AJ0|1|B1|G|41
*
5AJ0|1|B1|C|481
5AJ0|1|B1|G|482
5AJ0|1|B1|C|483
5AJ0|1|B1|A|484
5AJ0|1|B1|A|485
5AJ0|1|B1|A|486
5AJ0|1|B1|U|487
5AJ0|1|B1|U|488
5AJ0|1|B1|A|489
*
5AJ0|1|B1|U|511
5AJ0|1|B1|A|512
5AJ0|1|B1|G|513
5AJ0|1|B1|U|514
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BE
- 40S ribosomal protein S4, Y isoform 1
- Chain BJ
- 40S ribosomal protein S9
- Chain BX
- 40S ribosomal protein S23
- Chain BY
- 40S ribosomal protein S24
Coloring options: