J3_5APN_018
3D structure
- PDB id
- 5APN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.91 Å
Loop
- Sequence
- CUGAAGUG*CAAGG*CCUCUAG
- Length
- 20 nucleotides
- Bulged bases
- 5APN|1|5|A|1482
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5APN|1|5|C|1478
5APN|1|5|U|1479
5APN|1|5|G|1480
5APN|1|5|A|1481
5APN|1|5|A|1482
5APN|1|5|G|1483
5APN|1|5|U|1484
5APN|1|5|G|1485
*
5APN|1|5|C|1857
5APN|1|5|A|1858
5APN|1|5|A|1859
5APN|1|5|G|1860
5APN|1|5|G|1861
*
5APN|1|5|C|1869
5APN|1|5|C|1870
5APN|1|5|U|1871
5APN|1|5|C|1872
5APN|1|5|U|1873
5APN|1|5|A|1874
5APN|1|5|G|1875
Current chains
- Chain 5
- 25S rRNA
Nearby chains
- Chain R
- 60S ribosomal protein L19-A
- Chain d
- 60S ribosomal protein L31-A
- Chain g
- 60S ribosomal protein L34-A
Coloring options: