J3_5CZP_008

3D structure

PDB id

5CZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S termination complex containing E. coli RF2

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_5CZP_008 not in the Motif Atlas

Homologous match to J3_4LFB_005

Geometric discrepancy: 0.1464

The information below is about J3_4LFB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_84394.1

Basepair signature

cWW-tWH-F-F-cWW-F-cWW-F

Number of instances in this motif group

2

Unit IDs

5CZP|1|QA|C|990
5CZP|1|QA|U|991
5CZP|1|QA|U|992
5CZP|1|QA|G|993
*
5CZP|1|QA|C|1045
5CZP|1|QA|A|1046
5CZP|1|QA|G|1047
*
5CZP|1|QA|C|1210
5CZP|1|QA|U|1211
5CZP|1|QA|U|1212
5CZP|1|QA|A|1213
5CZP|1|QA|C|1214
5CZP|1|QA|G|1215

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QN

30S ribosomal protein S14 type Z

Chain QY

Peptide chain release factor 2