J3_5E7K_045
3D structure
- PDB id
- 5E7K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAAG*CGCCAGAGAG*CGUAG
- Length
- 20 nucleotides
- Bulged bases
- 5E7K|1|14|G|321
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5E7K_045 not in the Motif Atlas
- Homologous match to J3_9DFE_006
- Geometric discrepancy: 0.0783
- The information below is about J3_9DFE_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46299.2
- Basepair signature
- cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW
- Number of instances in this motif group
- 3
Unit IDs
5E7K|1|14|C|297
5E7K|1|14|G|298
5E7K|1|14|A|299
5E7K|1|14|A|300
5E7K|1|14|G|301
*
5E7K|1|14|C|316
5E7K|1|14|G|317
5E7K|1|14|C|318
5E7K|1|14|C|319
5E7K|1|14|A|320
5E7K|1|14|G|321
5E7K|1|14|A|322
5E7K|1|14|G|323
5E7K|1|14|A|324
5E7K|1|14|G|325
*
5E7K|1|14|C|337
5E7K|1|14|G|338
5E7K|1|14|U|339
5E7K|1|14|A|340
5E7K|1|14|G|341
Current chains
- Chain 14
- 23S rRNA
Nearby chains
- Chain 39
- 50S ribosomal protein L4
- Chain C5
- 50S ribosomal protein L24
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