J3_5FCJ_018
3D structure
- PDB id
- 5FCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UCUUAG*CGAGAC*GCAAUA
- Length
- 18 nucleotides
- Bulged bases
- 5FCJ|1|2|U|1285
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5FCJ_018 not in the Motif Atlas
- Homologous match to J3_8P9A_080
- Geometric discrepancy: 0.1571
- The information below is about J3_8P9A_080
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17077.1
- Basepair signature
- cWW-F-F-F-F-F-F-cWW-F-cWW-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
5FCJ|1|2|U|1283
5FCJ|1|2|C|1284
5FCJ|1|2|U|1285
5FCJ|1|2|U|1286
5FCJ|1|2|A|1287
5FCJ|1|2|G|1288
*
5FCJ|1|2|C|1327
5FCJ|1|2|G|1328
5FCJ|1|2|A|1329
5FCJ|1|2|G|1330
5FCJ|1|2|A|1331
5FCJ|1|2|C|1332
*
5FCJ|1|2|G|1419
5FCJ|1|2|C|1420
5FCJ|1|2|A|1421
5FCJ|1|2|A|1422
5FCJ|1|2|U|1423
5FCJ|1|2|A|1424
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain C6
- 40S ribosomal protein S16-A
- Chain C7
- 40S ribosomal protein S17-A
- Chain D0
- 40S ribosomal protein S20
- Chain D9
- 40S ribosomal protein S29-A
- Chain S2
- 40S ribosomal protein S2
- Chain S3
- 40S ribosomal protein S3
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