J3_5FLX_003
3D structure
- PDB id
- 5FLX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 40S HCV-IRES complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CCG*UUCCG*CAAAG
- Length
- 13 nucleotides
- Bulged bases
- 5FLX|1|1|C|1138
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5FLX|1|1|C|1094
5FLX|1|1|C|1095
5FLX|1|1|G|1096
*
5FLX|1|1|U|1136
5FLX|1|1|U|1137
5FLX|1|1|C|1138
5FLX|1|1|C|1139
5FLX|1|1|G|1140
*
5FLX|1|1|C|1147
5FLX|1|1|A|1148
5FLX|1|1|A|1149
5FLX|1|1|A|1150
5FLX|1|1|G|1151
Current chains
- Chain 1
- 18S RRNA
Nearby chains
- Chain A
- 40S RIBOSOMAL PROTEIN SA
- Chain N
- 40S RIBOSOMAL PROTEIN S13
- Chain V
- 40S RIBOSOMAL PROTEIN S21
- Chain W
- 40S RIBOSOMAL PROTEIN S15A
- Chain a
- 40S RIBOSOMAL PROTEIN S26
- Chain b
- 40S RIBOSOMAL PROTEIN S27
Coloring options: