J3_5FLX_013
3D structure
- PDB id
- 5FLX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 40S HCV-IRES complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UGGA*UUAAGA*UA
- Length
- 12 nucleotides
- Bulged bases
- 5FLX|1|1|G|921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5FLX|1|1|U|682
5FLX|1|1|G|683
5FLX|1|1|G|684
5FLX|1|1|A|685
*
5FLX|1|1|U|917
5FLX|1|1|U|918
5FLX|1|1|A|919
5FLX|1|1|A|920
5FLX|1|1|G|921
5FLX|1|1|A|922
*
5FLX|1|1|U|1022
5FLX|1|1|A|1023
Current chains
- Chain 1
- 18S RRNA
Nearby chains
- Chain H
- 40S RIBOSOMAL PROTEIN S7
- Chain L
- 40S RIBOSOMAL PROTEIN S11
- Chain N
- 40S RIBOSOMAL PROTEIN S13
- Chain W
- 40S RIBOSOMAL PROTEIN S15A
- Chain X
- 40S RIBOSOMAL PROTEIN S23
- Chain b
- 40S RIBOSOMAL PROTEIN S27
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