J3_5HAU_061
3D structure
- PDB id
- 5HAU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GCGGGAC*GGCAG*CC
- Length
- 14 nucleotides
- Bulged bases
- 5HAU|1|2A|A|1429
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5HAU_061 not in the Motif Atlas
- Homologous match to J3_9DFE_012
- Geometric discrepancy: 0.0815
- The information below is about J3_9DFE_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_31965.2
- Basepair signature
- cWW-F-cWW-F-F-F-F-F-cWW-F
- Number of instances in this motif group
- 6
Unit IDs
5HAU|1|2A|G|1389
5HAU|1|2A|C|1390
5HAU|1|2A|G|1391
5HAU|1|2A|G|1392
5HAU|1|2A|G|1393
5HAU|1|2A|A|1394
5HAU|1|2A|C|1395
*
5HAU|1|2A|G|1426
5HAU|1|2A|G|1427
5HAU|1|2A|C|1428
5HAU|1|2A|A|1429
5HAU|1|2A|G|1430
*
5HAU|1|2A|C|1447
5HAU|1|2A|C|1448
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 2V
- 50S ribosomal protein L23
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