J3_5HAU_074
3D structure
- PDB id
- 5HAU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GGA*UUUAAAG*CAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5HAU_074 not in the Motif Atlas
- Homologous match to J3_5J7L_040
- Geometric discrepancy: 0.1476
- The information below is about J3_5J7L_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_28621.5
- Basepair signature
- cWW-tSS-cSS-tSH-cWW-cWW-tWW-F-F
- Number of instances in this motif group
- 7
Unit IDs
5HAU|1|1A|G|1100
5HAU|1|1A|G|1101
5HAU|1|1A|A|1102
*
5HAU|1|1A|U|1126
5HAU|1|1A|U|1127
5HAU|1|1A|U|1128
5HAU|1|1A|A|1129
5HAU|1|1A|A|1130
5HAU|1|1A|A|1131
5HAU|1|1A|G|1132
*
5HAU|1|1A|C|1147
5HAU|1|1A|A|1148
5HAU|1|1A|C|1149
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 17
- 50S ribosomal protein L36
- Chain 1J
- 50S ribosomal protein L10
- Chain 1K
- 50S ribosomal protein L11
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