J3_5IMR_005

3D structure

PDB id

5IMR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 5.7 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

5IMR|1|A|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMR|1|A|C|990
5IMR|1|A|U|991
5IMR|1|A|U|992
5IMR|1|A|G|993
*
5IMR|1|A|C|1045
5IMR|1|A|A|1046
5IMR|1|A|G|1047
*
5IMR|1|A|C|1210
5IMR|1|A|U|1211
5IMR|1|A|U|1212
5IMR|1|A|A|1213
5IMR|1|A|C|1214
5IMR|1|A|G|1215

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain R

30S ribosomal protein S14 type Z