J3_5IMR_028
3D structure
- PDB id
- 5IMR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome bound to cofactor at 5.7 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- CGC*GGACUGCCC*GGGAGGAAGGAG
- Length
- 24 nucleotides
- Bulged bases
- 5IMR|1|A|C|1158, 5IMR|1|A|U|1159, 5IMR|1|A|G|1182, 5IMR|1|A|A|1183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5IMR|1|A|C|1116
5IMR|1|A|G|1117
5IMR|1|A|C|1118
*
5IMR|1|A|G|1155
5IMR|1|A|G|1156
5IMR|1|A|A|1157
5IMR|1|A|C|1158
5IMR|1|A|U|1159
5IMR|1|A|G|1160
5IMR|1|A|C|1161
5IMR|1|A|C|1162
5IMR|1|A|C|1163
*
5IMR|1|A|G|1173
5IMR|1|A|G|1174
5IMR|1|A|G|1175
5IMR|1|A|A|1176
5IMR|1|A|G|1177
5IMR|1|A|G|1178
5IMR|1|A|A|1179
5IMR|1|A|A|1180
5IMR|1|A|G|1181
5IMR|1|A|G|1182
5IMR|1|A|A|1183
5IMR|1|A|G|1184
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain F
- 30S ribosomal protein S2
- Chain K
- 30S ribosomal protein S7
- Chain M
- 30S ribosomal protein S9
- Chain R
- 30S ribosomal protein S14 type Z
Coloring options: