J3_5IMR_038

3D structure

PDB id

5IMR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 5.7 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

GCGG*CUAG*CGC

Length

11 nucleotides

Bulged bases

5IMR|1|A|A|653

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMR|1|A|G|585
5IMR|1|A|C|586
5IMR|1|A|G|587
5IMR|1|A|G|588
*
5IMR|1|A|C|651
5IMR|1|A|U|652
5IMR|1|A|A|653
5IMR|1|A|G|654
*
5IMR|1|A|C|754
5IMR|1|A|G|755
5IMR|1|A|C|756

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain L

30S ribosomal protein S8

Chain P

30S ribosomal protein S12

Chain S

30S ribosomal protein S15

Chain U

30S ribosomal protein S17