J3_5J7L_004

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUG*CGGAG*CGUUAAG

Length

16 nucleotides

Bulged bases

5J7L|1|AA|U|871

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_85054.3

Basepair signature

cWW-tSH-F-tWW-tHS-cWW-cWW-F

Number of instances in this motif group

4

Unit IDs

5J7L|1|AA|C|826
5J7L|1|AA|U|827
5J7L|1|AA|U|828
5J7L|1|AA|G|829
*
5J7L|1|AA|C|857
5J7L|1|AA|G|858
5J7L|1|AA|G|859
5J7L|1|AA|A|860
5J7L|1|AA|G|861
*
5J7L|1|AA|C|868
5J7L|1|AA|G|869
5J7L|1|AA|U|870
5J7L|1|AA|U|871
5J7L|1|AA|A|872
5J7L|1|AA|A|873
5J7L|1|AA|G|874

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AB

30S ribosomal protein S2

Chain AH

30S ribosomal protein S8

Chain AU

30S ribosomal protein S21