J3_5J7L_041

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGGAAG*CAG*CAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.6

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

5J7L|1|DA|C|1298
5J7L|1|DA|G|1299
5J7L|1|DA|G|1300
5J7L|1|DA|A|1301
5J7L|1|DA|A|1302
5J7L|1|DA|G|1303
*
5J7L|1|DA|C|1625
5J7L|1|DA|A|1626
5J7L|1|DA|G|1627
*
5J7L|1|DA|C|1639
5J7L|1|DA|A|1640
5J7L|1|DA|A|1641
5J7L|1|DA|G|1642

Current chains

Chain DA

23S rRNA

Nearby chains