J3_5J7L_069

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGGACG*CC*GAAAAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_34864.2

Basepair signature

cWW-F-cWW-F-tHH-F-tHS-tHS-cWW

Number of instances in this motif group

4

Unit IDs

5J7L|1|DA|G|1424
5J7L|1|DA|G|1425
5J7L|1|DA|G|1426
5J7L|1|DA|A|1427
5J7L|1|DA|C|1428
5J7L|1|DA|G|1429
*
5J7L|1|DA|C|1564
5J7L|1|DA|C|1565
*
5J7L|1|DA|G|1568
5J7L|1|DA|A|1569
5J7L|1|DA|A|1570
5J7L|1|DA|A|1571
5J7L|1|DA|A|1572
5J7L|1|DA|G|1573
5J7L|1|DA|C|1574

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DC

50S ribosomal protein L2